Brownie Bottom Mini Cheesecakes

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When I first made these Brownie Bottom Mini Cheesecakes, I knew I had stumbled on something dangerously delicious. The contrast between the rich, fudgy brownie base and the smooth, creamy cheesecake topping is simply irresistible. Add a glossy layer of melted chocolate and a generous pile of chocolate chips, and you’ve got a dessert that turns every head at the table.

What I love most is how these little treats look like they came straight from a fancy bakery, yet they’re surprisingly simple to make. Whether you’re hosting a dinner party or just want to spoil yourself with a luxurious bite-sized dessert, these mini cheesecakes are the perfect choice.

Why You’ll Love This Brownie Bottom Mini Cheesecakes Recipe

These mini cheesecakes pack a ton of flavor into a compact dessert. The brownie base is chewy and rich, perfectly complementing the velvety cheesecake layer on top. Plus, they’re ideal for portion control — although you’ll probably want more than one! They also store beautifully, making them a great make-ahead dessert.

What Kind of Chocolate Should I Use for the Ganache?

For a smooth and luscious ganache topping, I always recommend using semi-sweet or dark chocolate chips or bars with at least 60% cocoa. They balance the sweetness of the cheesecake and brownie base without being overpowering. Avoid using milk chocolate for this step as it can be too sweet in combination with the rest of the dessert.

Options for Substitutions

• Gluten-Free Option: Swap the brownie mix or base for a gluten-free brownie recipe or boxed mix.
• Dairy-Free Alternative: Use dairy-free cream cheese and chocolate alternatives. There are great vegan options available now.
• Flavor Variations: Add a hint of espresso powder to the brownie batter for a mocha twist, or swirl in raspberry preserves on top of the cheesecake before baking for a fruity contrast.
• Toppings: Instead of chocolate chips, try crushed nuts, caramel drizzle, or mini marshmallows for a different flavor and texture combo.

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Ingredients for this Brownie Bottom Mini Cheesecakes Recipe

• Brownie mix (or homemade brownie batter): Forms the dense, chewy base that provides a rich, chocolatey contrast to the creamy cheesecake.
• Butter: Used in both the brownie base (if homemade) and helps enhance flavor and texture.
• Cream cheese: The heart of the cheesecake layer, bringing a smooth, tangy richness.
• Granulated sugar: Sweetens the cheesecake mixture to balance the tanginess of the cream cheese.
• Eggs: Essential for binding and giving structure to both the brownie and cheesecake layers.
• Vanilla extract: Adds a warm, aromatic depth to the cheesecake filling.
• Heavy cream: Used to make the ganache extra silky and luscious.
• Semi-sweet chocolate chips: Melted into ganache and sprinkled on top for texture and extra indulgence.
• Salt: Enhances the flavors and balances the sweetness.

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Step 1: Preheat and Prepare

Start by preheating your oven to 325°F (163°C). Line a muffin tin with parchment or silicone liners. This helps with easy removal later and keeps the edges clean.

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Step 2: Make the Brownie Base

Prepare your brownie mix according to package instructions or mix up a quick homemade batter. Spoon about 1 to 2 tablespoons into each muffin cup and spread evenly. Bake the brownie bases for about 10–12 minutes until they start to set but aren’t fully baked. Let them cool slightly before adding the cheesecake layer.

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Step 3: Mix the Cheesecake Layer

In a large bowl, beat the softened cream cheese until smooth and lump-free. Add sugar, eggs, and vanilla extract, mixing well after each addition. Beat until silky and well combined. You want a creamy texture without overmixing, which can lead to cracks.

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Step 4: Assemble and Bake

Spoon the cheesecake mixture over the partially baked brownie bases, filling each cup nearly to the top. Smooth the tops with the back of a spoon. Return to the oven and bake for 15–18 minutes, or until the centers are just set and no longer jiggle. Let them cool in the pan before chilling.

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Step 5: Chill Thoroughly

Once cooled to room temperature, refrigerate the cheesecakes for at least 3–4 hours, or overnight. This ensures the cheesecake sets completely and makes them easier to remove from the liners.

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Step 6: Make the Ganache

Heat the heavy cream until just simmering, then pour over the semi-sweet chocolate chips. Let sit for 1–2 minutes, then stir until smooth and glossy. Let it cool slightly before topping the cheesecakes.

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Step 7: Decorate and Serve

Spoon the ganache over the chilled cheesecakes, letting it drip slightly down the sides. Top with extra chocolate chips or your favorite toppings. Serve chilled for the best texture and flavor.

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How Long to Prepare the Brownie Bottom Mini Cheesecakes

These mini cheesecakes are surprisingly easy to put together, and they reward your patience with bakery-quality results.

Active Time: Mixing and baking the brownie and cheesecake layers takes around 30 minutes. This includes preparing the batter, partially baking the brownie base, mixing the cheesecake filling, and assembling them in the muffin tin.

Inactive Time: The chilling step is crucial. After baking, you’ll need to cool them at room temperature for 30–45 minutes, then refrigerate for at least 3–4 hours (overnight is even better). Ganache prep and decorating adds another 15 minutes.

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Tips for Perfect Brownie Bottom Mini Cheesecakes

• Use room temperature cream cheese to ensure a smooth, lump-free filling.
• Don’t overmix the cheesecake batter — this introduces air and can cause cracking.
• Partially bake the brownie base to avoid undercooked bottoms.
• Line muffin tins with parchment or silicone liners for clean removal.
• Let the cheesecakes chill completely before adding ganache for the cleanest finish.

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Watch Out for These Mistakes While Cooking

• Using cold cream cheese: It won’t blend well and leaves lumps in the filling.
• Skipping the chilling time: The cheesecake won’t set properly, and it will be messy to serve.
• Overbaking: Leads to dry cheesecake and potential cracking.
• Filling too full: Leave a little space at the top for the ganache.
• Not letting the ganache cool: Hot ganache can melt the cheesecake topping.

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What to Serve With Brownie Bottom Mini Cheesecakes?

1. Fresh Berries

The tartness of raspberries, strawberries, or blueberries cuts through the richness perfectly.

2. Whipped Cream

A light, airy topping that complements the dense texture of the dessert.

3. Espresso or Strong Coffee

Bitterness from coffee pairs well with the sweetness and intensifies the chocolate flavor.

4. Vanilla Ice Cream

For a cool contrast to the creamy cheesecake and fudgy brownie.

5. Salted Caramel Sauce

A drizzle of caramel adds a buttery, salty-sweet finish.

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Storage Instructions

Refrigeration: Store the mini cheesecakes in an airtight container in the fridge for up to 5 days. Place parchment paper between layers if stacking to prevent sticking.

Freezing: You can freeze them without the ganache. Wrap each mini cheesecake tightly in plastic wrap, then place in a freezer bag or airtight container. Freeze for up to 2 months. Thaw in the refrigerator overnight and add ganache before serving.

Room Temperature: These are best kept chilled. Only leave out for 1–2 hours maximum when serving.

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Estimated Nutrition (per mini cheesecake)

• Calories: 320
• Fat: 22g
• Saturated Fat: 13g
• Carbohydrates: 28g
• Sugar: 20g
• Protein: 5g
• Fiber: 1g
• Cholesterol: 70mg
• Sodium: 140mg

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Frequently Asked Questions

What size muffin tin should I use?

A standard 12-cup muffin tin works best for even portions and easy baking.

Can I use boxed brownie mix?

Absolutely! A high-quality boxed mix saves time and still delivers great flavor.

Can I make these ahead of time?

Yes, they’re perfect make-ahead desserts. Prepare a day in advance and chill overnight.

How do I know when the cheesecakes are done baking?

The centers should be set and not jiggle when gently shaken. A slight puff is okay.

Can I add other toppings besides chocolate chips?

Definitely. Try fresh fruit, caramel drizzle, cookie crumbs, or even chopped nuts.

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Conclusion

Brownie Bottom Mini Cheesecakes are a dream for anyone who loves a mix of fudgy chocolate and creamy cheesecake. With their elegant look, rich taste, and customizable toppings, they’re ideal for celebrations, gifts, or simply treating yourself. They’re easy to prepare, even easier to love, and bound to become one of your go-to dessert recipes.

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